I am giving this a bad rating because I enjoy the overall concept but this is more a "do X actions in X order to win" puzzle game rather than what I feel is a idle/incremental that you can just build up to progress easier/faster each run and or increase efficiency per run.

The only real continuity between runs is some chapter points you earn to get more XP to let you get more XP or maybe speed up time (global time so the enemy moves the same speed you do). There is no way to progress nodes faster or alter anything beyond just learning what order you need to do tasks.